0.1.0 - ci-build
0.1.0 - ci-build
HL7CGModels - Local Development build (v0.1.0). See the Directory of published versions
| Active as of 2022-03-10 |
Definitions for the GenomeSequenceDesignation logical model.
| 1. GenomeSequenceDesignation | |
| Definition | Datatype to support FHIR Genomics. This datatype supports representations like GRCH38.p13 Chromosome 1 |
| Control | 0..* This element is affected by the following invariants: ele-1 |
| Invariants | Defined on this element ele-1: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count())) |
| 2. GenomeSequenceDesignation.id | |
| Definition | Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. |
| Control | 0..1 |
| Type | string |
| 3. GenomeSequenceDesignation.extension | |
| Definition | May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
| Control | 0..* |
| Type | Extension |
| Alternate Names | extensions, user content |
| Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
| Invariants | Defined on this element ele-1: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count())) ext-1: Must have either extensions or value[x], not both (: extension.exists() != value.exists()) |
| Slicing | This element introduces a set of slices on GenomeSequenceDesignation.extension. The slices are unordered and Open, and can be differentiated using the following discriminators:
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| 4. GenomeSequenceDesignation.build | |
| Definition | The identifier of a genome build, which contains a sequence of interest. |
| Control | 1..1 |
| Type | Identifier |
| 5. GenomeSequenceDesignation.organism | |
| Definition | The organism corresponding to the genome sequence, preferably expressed using an NCBI taxonomy code. |
| Control | 0..1 |
| Type | CodeableConcept |
| 6. GenomeSequenceDesignation.description | |
| Definition | A description of the genome sequence. |
| Control | 0..1 |
| Type | string |
| 7. GenomeSequenceDesignation.accession | |
| Definition | The accession number of the Genome Build |
| Control | 0..1 |
| Type | CodeableConcept |
| 8. GenomeSequenceDesignation.chromosome | |
| Definition | The name or number (preferably coded) of the chromosome represented by the genome sequence. |
| Control | 1..1 |
| Type | CodeableConcept |